GSVIVT01016065001

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA1 component

Gene families : OG0001506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001506_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01016065001
Cluster	HCCA: Cluster_86

Target	Alias	Description	ECC score	Gene Family Method
Adi_g103257	No alias	component *(ADA1) of SAGA transcription co-activator...	0.02	OrthoFinder output from all 47 species
Ceric.25G027300.1	Ceric.25G027300	component *(ADA1) of SAGA transcription co-activator...	0.03	OrthoFinder output from all 47 species
Lfl_g02173	No alias	component *(ADA1) of SAGA transcription co-activator...	0.03	OrthoFinder output from all 47 species
Sam_g10664	No alias	component *(ADA1) of SAGA transcription co-activator...	0.02	OrthoFinder output from all 47 species
Solyc03g117820.1.1	Solyc03g117820	component ADA1 of SAGA transcription co-activator complex	0.06	OrthoFinder output from all 47 species
Solyc06g068610.3.1	Solyc06g068610	component ADA1 of SAGA transcription co-activator complex	0.04	OrthoFinder output from all 47 species
Zm00001e005767_P001	Zm00001e005767	component ADA1 of SAGA transcription co-activator complex	0.05	OrthoFinder output from all 47 species
Zm00001e041823_P001	Zm00001e041823	component ADA1 of SAGA transcription co-activator complex	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0031248	protein acetyltransferase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0070461	SAGA-type complex	IEA	Interproscan
CC	GO:0140535	intracellular protein-containing complex	None	Extended
CC	GO:1902493	acetyltransferase complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005525	GTP binding	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR024738	Hfi1/Tada1	6	133

External Links

No external refs found!