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  5. GSVIVT01016026001

GSVIVT01016026001 (LAC4, IRX12, ATLMCO4, LMCO4)


Aliases : LAC4, IRX12, ATLMCO4, LMCO4

Description : Laccase-4 OS=Arabidopsis thaliana


Gene families : OG0000044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016026001
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00212330 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00051360 LAC12,... Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.04 OrthoFinder output from all 47 species
AMTR_s00055p00189700 ATLAC17, LAC17,... Cell wall.lignin.monolignol conjugation and... 0.03 OrthoFinder output from all 47 species
AMTR_s00055p00190270 ATLAC17, LAC17,... Cell wall.lignin.monolignol conjugation and... 0.03 OrthoFinder output from all 47 species
AT1G18140 LAC1, ATLAC1 laccase 1 0.06 OrthoFinder output from all 47 species
Adi_g124172 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aob_g15151 LAC12 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aspi01Gene27422.t1 LAC4, IRX12,... EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Aspi01Gene31365.t1 ATLAC17, LAC17,... EC_1.10 oxidoreductase acting on diphenol or related... 0.05 OrthoFinder output from all 47 species
Azfi_s0008.g011489 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Azfi_s0347.g066415 ATLAC2, LAC2 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
GSVIVT01012346001 LAC14 Laccase-14 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01034003001 LAC4, IRX12,... Cell wall.lignin.monolignol conjugation and... 0.03 OrthoFinder output from all 47 species
LOC_Os03g16610.1 ATLAC17, LAC17,... lignin laccase 0.02 OrthoFinder output from all 47 species
LOC_Os11g42220.1 LAC7, LOC_Os11g42220 Laccase-20 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_10433259g0010 LAC11 Laccase-2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_185257g0010 LAC12 Laccase-12 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_5717063g0010 ATLAC17, LAC17 Laccase-4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_785232g0010 ATLAC17, LAC17 Laccase-4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
MA_9337419g0010 ATLAC2, LAC2 Laccase-22 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Solyc05g052360.2.1 LAC5, Solyc05g052360 Laccase-12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc05g052370.3.1 LAC12, Solyc05g052370 Laccase-12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e019268_P001 LAC7, Zm00001e019268 Laccase-6 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Zm00001e019303_P001 ATLAC2, LAC2,... lignin laccase 0.02 OrthoFinder output from all 47 species
Zm00001e031826_P001 ATLAC17, LAC17,... lignin laccase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
InterPro domains Description Start Stop
IPR011706 Cu-oxidase_C 6 83
No external refs found!