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  5. GSVIVT01015994001

GSVIVT01015994001 (CAS1)


Aliases : CAS1

Description : Secondary metabolism.terpenoids.terpenoid synthesis.cycloartenol synthesis.cycloartenol synthase


Gene families : OG0000781 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000781_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015994001

Target Alias Description ECC score Gene Family Method Actions
AT1G66960 No alias Terpenoid cyclases family protein 0.07 OrthoFinder output from all 47 species
AT1G78950 No alias Terpenoid cyclases family protein 0.03 OrthoFinder output from all 47 species
AT2G07050 CAS1 cycloartenol synthase 1 0.05 OrthoFinder output from all 47 species
Aev_g07954 CAS1 EC_5.4 intramolecular transferase & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g19109 CAS1 triterpenoid synthase & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01021474001 CAMS1 Secondary metabolism.terpenoids.terpenoid... 0.05 OrthoFinder output from all 47 species
GSVIVT01029470001 No alias Beta-Amyrin Synthase 2 OS=Panax ginseng 0.03 OrthoFinder output from all 47 species
GSVIVT01029508001 No alias Secondary metabolism.terpenoids.terpenoid... 0.18 OrthoFinder output from all 47 species
GSVIVT01029510001 No alias Secondary metabolism.terpenoids.terpenoid... 0.05 OrthoFinder output from all 47 species
GSVIVT01029523001 No alias Secondary metabolism.terpenoids.terpenoid... 0.05 OrthoFinder output from all 47 species
GSVIVT01029525001 CAS1 Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
LOC_Os11g18310.1 LOC_Os11g18310 Achilleol B synthase OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Sam_g04482 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g18660 No alias EC_5.4 intramolecular transferase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25536 CAS1 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032696 SQ_cyclase_C 218 553
IPR032697 SQ_cyclase_N 1 170
No external refs found!