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  5. GSVIVT01015712001

GSVIVT01015712001


No description available


Gene families : OG0000989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000989_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015712001
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AT5G45530 No alias Protein of unknown function (DUF594) 0.05 OrthoFinder output from all 47 species
AT5G45540 No alias Protein of unknown function (DUF594) 0.04 OrthoFinder output from all 47 species
Ala_g34202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010816001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01014447001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os04g07250.1 LOC_Os04g07250 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g01520.1 LOC_Os07g01520 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g08290.1 LOC_Os07g08290 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g20770.1 LOC_Os10g20770 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g42080.1 LOC_Os11g42080 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g21940.1 LOC_Os12g21940 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Nbi_g03106 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc12g094650.3.1 Solyc12g094650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g32451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e036718_P001 Zm00001e036718 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
InterPro domains Description Start Stop
IPR007658 DUF594 374 427
IPR025315 DUF4220 70 148
No external refs found!