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Description : RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor
Gene families : OG0000614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000614_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01015500001 | |
| Cluster | HCCA: Cluster_95 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00111p00144160 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g074564 | No alias | A1-class (Pepsin) protease & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g081309 | No alias | regulatory protein of RNA homeostasis & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g01754 | No alias | regulatory protein of RNA homeostasis & original... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g00493 | No alias | regulatory protein of RNA homeostasis & original... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g28039 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g29816 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g09759 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g12900 | No alias | regulatory protein of RNA homeostasis & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g05890 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g15252 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g11119 | No alias | regulatory protein of RNA homeostasis & original... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046872 | metal ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
| BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
| BP | GO:0023051 | regulation of signaling | IEP | HCCA |
| BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000571 | Znf_CCCH | 134 | 160 |
| No external refs found! |