1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01015420001

GSVIVT01015420001


Description : Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana


Gene families : OG0000090 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000090_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015420001

Target Alias Description ECC score Gene Family Method Actions
AT1G06330 No alias Heavy metal transport/detoxification superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G22990 HIPP22 Heavy metal transport/detoxification superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G71050 HIPP20 Heavy metal transport/detoxification superfamily protein 0.01 OrthoFinder output from all 47 species
AT3G48970 No alias Heavy metal transport/detoxification superfamily protein 0.01 OrthoFinder output from all 47 species
AT3G56891 No alias Heavy metal transport/detoxification superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G08570 No alias Heavy metal transport/detoxification superfamily protein 0.01 OrthoFinder output from all 47 species
Aev_g19203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26991 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g12214 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g36796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11345 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene15074.t1 CCH, Aspi01Gene15074 copper chaperone *(ATX/CCH) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene16664.t1 Aspi01Gene16664 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene59197.t1 Aspi01Gene59197 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0022.g015902 CCH copper chaperone *(ATX/CCH) & original description: CDS=82-618 0.01 OrthoFinder output from all 47 species
Cba_g10594 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.15G056700.1 Ceric.15G056700 not classified & original description: pacid=50640002... 0.02 OrthoFinder output from all 47 species
Ceric.27G066000.1 Ceric.27G066000 not classified & original description: pacid=50605531... 0.02 OrthoFinder output from all 47 species
LOC_Os01g74490.1 LOC_Os01g74490 Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g32237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_185735g0010 No alias Heavy metal-associated isoprenylated plant protein 23... 0.02 OrthoFinder output from all 47 species
MA_38922g0010 No alias Heavy metal-associated isoprenylated plant protein 20... 0.01 OrthoFinder output from all 47 species
MA_84241g0010 No alias Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0144.g022933 No alias not classified & original description: CDS=131-1195 0.01 OrthoFinder output from all 47 species
Solyc04g054500.3.1 Solyc04g054500 Heavy metal-associated isoprenylated plant protein 23... 0.04 OrthoFinder output from all 47 species
Solyc05g055310.3.1 ATX1, ATATX1,... copper chaperone (CCH) 0.03 OrthoFinder output from all 47 species
Solyc07g017405.1.1 Solyc07g017405 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Spa_g12744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006121 HMA_dom 71 124
No external refs found!