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  5. GSVIVT01015223001

GSVIVT01015223001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor


Gene families : OG0000160 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015223001
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00127760 evm_27.TU.AmTr_v1... Transcription factor KUA1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT5G01200 No alias Duplicated homeodomain-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g012577 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Ala_g04004 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Als_g10157 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Als_g39083 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Aob_g01227 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Aop_g13795 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene17162.t1 Aspi01Gene17162 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0160.g054011 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s3749.g116750 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Cba_g59463 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Cba_g60011 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Ceric.34G025300.1 Ceric.34G025300 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Cre03.g198800 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Dac_g03644 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g08181 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g27445 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01020132001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_38078 No alias transcription factor (MYB-related) 0.05 OrthoFinder output from all 47 species
LOC_Os01g04930.1 LOC_Os01g04930 transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
LOC_Os01g09640.1 LOC_Os01g09640 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
LOC_Os05g10690.1 LOC_Os05g10690 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
LOC_Os05g37730.1 LOC_Os05g37730 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Lfl_g05441 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
MA_41803g0010 No alias transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Msp_g03909 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g13154 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.05 OrthoFinder output from all 47 species
Nbi_g23525 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.05 OrthoFinder output from all 47 species
Pir_g10678 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Pir_g63199 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g22164 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g31676 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020234 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0538.g027475 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Sam_g09251 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Solyc03g113620.3.1 Solyc03g113620 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Spa_g25374 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Spa_g50779 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Tin_g10751 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e017388_P001 Zm00001e017388 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Zm00001e019190_P001 Zm00001e019190 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Zm00001e019254_P001 Zm00001e019254 transcription factor (MYB-related) 0.06 OrthoFinder output from all 47 species
Zm00001e025784_P001 Zm00001e025784 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Zm00001e028729_P001 Zm00001e028729 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Zm00001e031738_P001 Zm00001e031738 transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
Zm00001e042486_P001 Zm00001e042486 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 103 147
No external refs found!