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  5. GSVIVT01015144001

GSVIVT01015144001


Description : Cytoskeleton.cp-actin-dependent plastid movement.PMIR cp-actin stability co-factor


Gene families : OG0001272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015144001
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AT5G20610 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.07 OrthoFinder output from all 47 species
Adi_g011310 No alias actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G005400.1 Ceric.16G005400 actin stability co-factor *(PMIR) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g01910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12606 No alias actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g51640.1 LOC_Os01g51640 actin stability co-factor (PMIR) 0.02 OrthoFinder output from all 47 species
Lfl_g02431 No alias actin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17701 PMI1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37676 PMI1 actin stability factor *(PMI1) & original description: none 0.03 OrthoFinder output from all 47 species
Smo111808 No alias Cytoskeleton.cp-actin-dependent plastid movement.PMIR... 0.03 OrthoFinder output from all 47 species
Solyc07g041180.4.1 Solyc07g041180 actin stability co-factor (PMIR) 0.02 OrthoFinder output from all 47 species
Solyc08g062500.3.1 Solyc08g062500 actin stability co-factor (PMIR) 0.04 OrthoFinder output from all 47 species
Spa_g56268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11028 No alias acTin stability co-factor *(PMIR) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 118 259
No external refs found!