- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
No description available
Gene families : OG0000329 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000329_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01014741001 | |
| Cluster | HCCA: Cluster_52 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00033p00173430 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00049p00216010 | evm_27.TU.AmTr_v1... | No description available | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00061p00175960 | evm_27.TU.AmTr_v1... | No description available | 0.06 | OrthoFinder output from all 47 species | |
| AT1G24577 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.01 | OrthoFinder output from all 47 species | |
| AT1G67910 | No alias | unknown protein; FUNCTIONS IN: molecular_function... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G13227 | No alias | serine-rich protein-related | 0.11 | OrthoFinder output from all 47 species | |
| Aev_g08787 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aev_g18597 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g06236 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g18071 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G069700.1 | Ceric.22G069700 | not classified & original description: pacid=50613862... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G052300.1 | Ceric.31G052300 | not classified & original description: pacid=50574066... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g12479 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g29180 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01012865001 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
| Gb_11274 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_37466 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_37761 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g20880 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g49963 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g10535 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_11260g0020 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_9485570g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| MA_94914g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g25615 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g00231 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g42392 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g07382 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g03207 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003779 | actin binding | IEP | HCCA |
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | HCCA |
| BP | GO:0010215 | cellulose microfibril organization | IEP | HCCA |
| MF | GO:0015299 | obsolete solute:proton antiporter activity | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| BP | GO:0016049 | cell growth | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0016837 | carbon-oxygen lyase activity, acting on polysaccharides | IEP | HCCA |
| BP | GO:0030198 | extracellular matrix organization | IEP | HCCA |
| MF | GO:0030570 | pectate lyase activity | IEP | HCCA |
| MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
| CC | GO:0031225 | obsolete anchored component of membrane | IEP | HCCA |
| BP | GO:0040007 | growth | IEP | HCCA |
| BP | GO:0042545 | cell wall modification | IEP | HCCA |
| BP | GO:0043062 | extracellular structure organization | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |