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  5. GSVIVT01014553001

GSVIVT01014553001


Description : RNA processing.organelle machineries.RNA editing.ORRM-type RNA editing factor


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014553001

Target Alias Description ECC score Gene Family Method Actions
AT3G23830 GR-RBP4, GRP4 glycine-rich RNA-binding protein 4 0.05 OrthoFinder output from all 47 species
AT4G13850 GRP2, ATGRP2, GR-RBP2 glycine-rich RNA-binding protein 2 0.06 OrthoFinder output from all 47 species
Als_g44805 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g01126 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52246.t1 Aspi01Gene52246 RNA chaperone *(RZ1) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os08g04440.1 LOC_Os08g04440 RNA editing factor (ORRM) 0.06 OrthoFinder output from all 47 species
Lfl_g05878 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.04 OrthoFinder output from all 47 species
MA_77292g0010 No alias RNA editing factor (ORRM) 0.03 OrthoFinder output from all 47 species
Pp3c12_23410V3.1 GRP2, ATGRP2,... glycine-rich RNA-binding protein 3 0.02 OrthoFinder output from all 47 species
Pp3c4_6610V3.1 GRP2, ATGRP2,... glycine-rich RNA-binding protein 3 0.01 OrthoFinder output from all 47 species
Solyc10g084630.2.1 Solyc10g084630 Organelle RRM domain-containing protein 2, mitochondrial... 0.04 OrthoFinder output from all 47 species
Zm00001e040294_P001 Zm00001e040294 RNA editing factor (ORRM) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 43 109
No external refs found!