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  5. GSVIVT01014389001

GSVIVT01014389001


Description : COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana


Gene families : OG0001278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014389001
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
Ala_g10731 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G113100.1 Ceric.01G113100 not classified & original description: pacid=50591929... 0.03 OrthoFinder output from all 47 species
Ceric.06G089300.1 Ceric.06G089300 not classified & original description: pacid=50619072... 0.02 OrthoFinder output from all 47 species
Dcu_g45060 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01034183001 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.01 OrthoFinder output from all 47 species
Msp_g14540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g015955 No alias not classified & original description: CDS=1-2550 0.03 OrthoFinder output from all 47 species
Solyc08g082900.4.1 Solyc08g082900 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 286 318
IPR001680 WD40_repeat 395 431
IPR001680 WD40_repeat 437 474
No external refs found!