GSVIVT01014369001

Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NUG2 regulatory GTPase

Gene families : OG0005924 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005924_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01014369001
Cluster	HCCA: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
AT1G52980	No alias	GTP-binding family protein	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000194.42	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Cre07.g340050	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.05	OrthoFinder output from all 47 species
Gb_01485	No alias	NUG2 LSU processome regulatory GTPase	0.03	OrthoFinder output from all 47 species
Mp2g16460.1	No alias	NUG2 LSU processome regulatory GTPase	0.05	OrthoFinder output from all 47 species
Ore_g38488	No alias	regulatory GTPase (NUG2) of LSU processome & original...	0.03	OrthoFinder output from all 47 species
Solyc07g063270.3.1	Solyc07g063270	NUG2 LSU processome regulatory GTPase	0.05	OrthoFinder output from all 47 species
Zm00001e001677_P001	Zm00001e001677	NUG2 LSU processome regulatory GTPase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR012971	NOG2_N_dom	1	126
IPR006073	GTP-bd	269	354

External Links

No external refs found!