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  5. GSVIVT01014262001

GSVIVT01014262001


Description : Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF243 protein


Gene families : OG0000548 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014262001

Target Alias Description ECC score Gene Family Method Actions
Dde_g01331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11755 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01035558001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_09350 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_38230 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_38231 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g32100.1 LOC_Os09g32100 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023064 No alias not classified & original description: CDS=642-1325 0.04 OrthoFinder output from all 47 species
Sam_g08079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo105772 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g00279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g03001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g49942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e034570_P003 Zm00001e034570 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006013 mannose metabolic process IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006747 DUF599 419 621
No external refs found!