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  5. GSVIVT01014223001

GSVIVT01014223001


Description : RNA processing.organelle machineries.RNA editing.MORF-type RNA editing factor


Gene families : OG0010925 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010925_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014223001
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00105410 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.06 OrthoFinder output from all 47 species
Gb_00162 No alias RNA editing factor (MORF) 0.03 OrthoFinder output from all 47 species
LOC_Os09g33480.1 LOC_Os09g33480 RNA editing factor (MORF) 0.03 OrthoFinder output from all 47 species
MA_10293670g0010 No alias RNA editing factor (MORF) 0.06 OrthoFinder output from all 47 species
MA_10430373g0010 No alias RNA editing factor (MORF) 0.04 OrthoFinder output from all 47 species
MA_8126g0010 No alias Multiple organellar RNA editing factor 8,... 0.03 OrthoFinder output from all 47 species
Solyc10g007180.2.1 Solyc10g007180 RNA editing factor (MORF) 0.03 OrthoFinder output from all 47 species
Solyc12g014230.2.1 Solyc12g014230 RNA editing factor (MORF) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!