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  5. GSVIVT01014181001

GSVIVT01014181001 (ATRABA1B, RAB11, RABA1b)


Aliases : ATRABA1B, RAB11, RABA1b

Description : Ras-related protein RIC2 OS=Oryza sativa subsp. japonica


Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014181001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00189630 AtRABA1f,... Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
AMTR_s00071p00201210 ATRABA2A,... Vesicle trafficking.regulation of membrane tethering and... 0.04 OrthoFinder output from all 47 species
Adi_g001047 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078038 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00456.t1 AtRABA1f,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0056.g034200 AtRABA1f, RABA1f A-class RAB GTPase & original description: CDS=99-740 0.02 OrthoFinder output from all 47 species
Cba_g09596 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26391 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
MA_109703g0010 AtRABA1f, RABA1f A-class RAB GTPase 0.05 OrthoFinder output from all 47 species
Ore_g15960 AtRABA5b, RABA5b A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09793 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004609 phosphatidylserine decarboxylase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 15 94
No external refs found!