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  5. GSVIVT01014097001

GSVIVT01014097001 (LZF1, STH3, DBB3)


Aliases : LZF1, STH3, DBB3

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.BBX/DBB transcription factor


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014097001
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AT2G47890 No alias B-box type zinc finger protein with CCT domain 0.02 OrthoFinder output from all 47 species
Aspi01Gene45209.t1 LZF1, STH3,... BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62651.t2 Aspi01Gene62651 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63907.t1 Aspi01Gene63907 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12122 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16992 STO BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g110370.4.1 Solyc01g110370 transcription factor (BBX-DBB) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR000315 Znf_B-box 53 93
No external refs found!