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  5. GSVIVT01013854001

GSVIVT01013854001 (SUVH5, SGD9)


Aliases : SUVH5, SGD9

Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class V/Su(var) histone methyltransferase component


Gene families : OG0000291 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000291_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013854001
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00104700 SUVH5, SGD9,... Chromatin organisation.histone modifications.histone... 0.05 OrthoFinder output from all 47 species
Adi_g009459 SDG33, SUVH4, KYP histone H3K9 methyltransferase *(KYP) & original... 0.06 OrthoFinder output from all 47 species
Als_g14485 SDG33, SUVH4, KYP EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene18047.t1 SDG33, SUVH4,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31893.t1 SDG23, SUVH6,... EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene53627.t1 SDG23, SUVH6,... EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Ceric.36G048900.1 SDG33, SUVH4,... EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
LOC_Os07g25450.1 ATSUVH2, SDG3,... class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
Len_g54963 SDG33, SUVH4, KYP EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Lfl_g27877 SDG33, SUVH4, KYP EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
MA_790260g0010 SUVH5, SGD9 class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
Nbi_g01190 SDG33, SUVH4, KYP EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Solyc03g093700.3.1 SDG23, SUVH6,... class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species
Zm00001e027327_P003 SUVH1, Zm00001e027327 class V/Su(var) histone methyltransferase component of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007728 Pre-SET_dom 195 290
IPR001214 SET_dom 309 413
IPR003105 SRA_YDG 16 164
No external refs found!