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  5. GSVIVT01013790001

GSVIVT01013790001 (KNAT6, KNAT6L, KNAT6S)


Aliases : KNAT6, KNAT6L, KNAT6S

Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.KNOX transcription factor


Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013790001
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00169620 KNAT6, KNAT6L,... RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
AMTR_s00085p00165180 KNAT6, KNAT6L,... RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
AT1G23380 KNAT6, KNAT6L, KNAT6S KNOTTED1-like homeobox gene 6 0.06 OrthoFinder output from all 47 species
AT1G70510 KNAT2, ATK1 KNOTTED-like from Arabidopsis thaliana 2 0.04 OrthoFinder output from all 47 species
AT4G08150 BP, BP1, KNAT1 KNOTTED-like from Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Adi_g019966 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060986 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g085793 BUM1, SHL, STM,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13164 KNAT3 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21619 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02808 No alias KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15588 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08926 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22220 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08816 KNAT3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g27530 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09486.t1 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12299.t1 BP, BP1, KNAT1,... KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30735.t1 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene56442.t2 KNAT3, Aspi01Gene56442 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000431 KNAT7, IXR11 KNOX-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009595 BUM1, SHL, STM,... KNOX-type transcription factor & original description: CDS=1-1050 0.03 OrthoFinder output from all 47 species
Azfi_s0350.g066569 BUM1, SHL, STM,... KNOX-type transcription factor & original description: CDS=1-1488 0.05 OrthoFinder output from all 47 species
Cba_g05224 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g09026 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g09456 KNAT3 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.10G031700.1 KNAT3, Ceric.10G031700 KNOX-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.13G020400.1 KNAT3, Ceric.13G020400 KNOX-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.20G046300.1 BUM1, SHL, STM,... KNOX-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g03334 KNAT3 KNOX-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g28016 KNAT3 KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01007715001 KNAT6, KNAT6L, KNAT6S RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
Gb_00573 BUM1, SHL, STM,... transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
Gb_10887 BP, BP1, KNAT1 transcription factor (KNOX) 0.05 OrthoFinder output from all 47 species
LOC_Os01g19694.1 KNAT6, KNAT6L,... transcription factor (KNOX) 0.02 OrthoFinder output from all 47 species
LOC_Os03g51690.2 BP, BP1, KNAT1,... transcription factor (KNOX) 0.04 OrthoFinder output from all 47 species
LOC_Os03g51710.1 BP, BP1, KNAT1,... transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
LOC_Os03g56140.1 BP, BP1, KNAT1,... transcription factor (KNOX) 0.04 OrthoFinder output from all 47 species
LOC_Os05g03884.1 KNAT6, KNAT6L,... transcription factor (KNOX) 0.05 OrthoFinder output from all 47 species
LOC_Os07g03770.1 BP, BP1, KNAT1,... transcription factor (KNOX) 0.05 OrthoFinder output from all 47 species
LOC_Os08g19650.1 KNAT3, LOC_Os08g19650 transcription factor (KNOX) 0.04 OrthoFinder output from all 47 species
Len_g00731 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05424 KNAT3 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_9556g0010 BP, BP1, KNAT1 transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
Nbi_g05715 KNAT3 KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25139 KNAT3 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25528 BP, BP1, KNAT1 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31220 KNAT4 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35975 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g62008 KNAT3 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06826 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17826 KNAT3 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20569 KNAT3 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10499 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g16367 KNAT3 KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004352 KNAT4 KNOX-type transcription factor & original description: CDS=1-1356 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019792 KNAT7, IXR11 not classified & original description: CDS=1-462 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0250.g026749 KNAT3 not classified & original description: CDS=1-780 0.03 OrthoFinder output from all 47 species
Sam_g01264 No alias KNOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g27266 No alias KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36645 No alias KNOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo159366 BP, BP1, KNAT1 RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
Solyc02g081120.4.1 BUM1, SHL, STM,... transcription factor (KNOX) 0.04 OrthoFinder output from all 47 species
Solyc04g077210.3.1 BP, BP1, KNAT1,... transcription factor (KNOX) 0.07 OrthoFinder output from all 47 species
Solyc05g005090.4.1 KNAT6, KNAT6L,... transcription factor (KNOX) 0.06 OrthoFinder output from all 47 species
Spa_g06070 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24646 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g10831 BUM1, SHL, STM,... KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12897 KNAT3 KNOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005545_P001 BP, BP1, KNAT1,... transcription factor (KNOX) 0.09 OrthoFinder output from all 47 species
Zm00001e005547_P001 BP, BP1, KNAT1,... transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
Zm00001e005825_P002 BP, BP1, KNAT1,... transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species
Zm00001e011538_P001 BP, BP1, KNAT1,... transcription factor (KNOX) 0.08 OrthoFinder output from all 47 species
Zm00001e017489_P001 KNAT6, KNAT6L,... transcription factor (KNOX) 0.07 OrthoFinder output from all 47 species
Zm00001e027562_P001 KNAT6, KNAT6L,... transcription factor (KNOX) 0.09 OrthoFinder output from all 47 species
Zm00001e029453_P001 KNAT6, KNAT6L,... transcription factor (KNOX) 0.07 OrthoFinder output from all 47 species
Zm00001e032761_P001 BP, BP1, KNAT1,... transcription factor (KNOX) 0.06 OrthoFinder output from all 47 species
Zm00001e039044_P001 KNAT7, IXR11,... transcription factor (KNOX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015858 nucleoside transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901642 nucleoside transmembrane transport IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008422 Homeobox_KN_domain 255 294
IPR005540 KNOX1 80 121
IPR005541 KNOX2 132 178
IPR005539 ELK_dom 215 236
No external refs found!