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  5. GSVIVT01013665001

GSVIVT01013665001


Description : 17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica


Gene families : OG0000041 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013665001
Cluster HCCA: Cluster_361

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00244960 HSP18.2,... 18.1 kDa class I heat shock protein OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Aev_g23010 HSP18.2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g34141 ATHSP17.4, HSP17.4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51399 HSP18.2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30266 HSP18.2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31255 HSP18.2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g008067 ATHSP17.4, HSP17.4 not classified & original description: CDS=1-531 0.05 OrthoFinder output from all 47 species
Azfi_s0446.g070658 HSP18.2 not classified & original description: CDS=359-871 0.05 OrthoFinder output from all 47 species
Ceric.05G086800.1 Ceric.05G086800 not classified & original description: pacid=50577531... 0.06 OrthoFinder output from all 47 species
Ceric.17G067700.1 ATHSP17.4,... not classified & original description: pacid=50618365... 0.04 OrthoFinder output from all 47 species
Ceric.20G069600.1 HSP18.2, Ceric.20G069600 not classified & original description: pacid=50567477... 0.04 OrthoFinder output from all 47 species
Ceric.22G049300.1 HSP18.2, Ceric.22G049300 not classified & original description: pacid=50615198... 0.06 OrthoFinder output from all 47 species
Ceric.36G025900.1 HSP18.2, Ceric.36G025900 not classified & original description: pacid=50568453... 0.04 OrthoFinder output from all 47 species
Dac_g00096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10910 HSP18.2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g16041 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g04340.1 HSP18.2, LOC_Os01g04340 16.6 kDa heat shock protein OS=Oryza sativa subsp.... 0.08 OrthoFinder output from all 47 species
LOC_Os01g04370.1 HSP18.2, LOC_Os01g04370 class-C-I small heat-shock-responsive protein 0.05 OrthoFinder output from all 47 species
LOC_Os01g04380.1 HSP18.2, LOC_Os01g04380 class-C-I small heat-shock-responsive protein 0.08 OrthoFinder output from all 47 species
LOC_Os01g08860.1 HSP17.6II, LOC_Os01g08860 class-C-II small heat-shock-responsive protein 0.08 OrthoFinder output from all 47 species
LOC_Os03g15960.1 ATHSP17.4,... class-C-I small heat-shock-responsive protein 0.08 OrthoFinder output from all 47 species
LOC_Os04g36750.1 ATHSP22.0, LOC_Os04g36750 class-ER small heat-shock-responsive protein 0.09 OrthoFinder output from all 47 species
LOC_Os11g13980.1 ATHSP22.0, LOC_Os11g13980 21.9 kDa heat shock protein OS=Oryza sativa subsp.... 0.08 OrthoFinder output from all 47 species
Lfl_g13918 HSP17.6A,... class-C-II small heat-shock-responsive protein &... 0.02 OrthoFinder output from all 47 species
Msp_g31070 ATHSP17.4, HSP17.4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g21029 No alias class-PX small heat-shock-responsive protein & original... 0.02 OrthoFinder output from all 47 species
Ppi_g24404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g072250.4.1 Solyc04g072250 17.5 kDa class I heat shock protein OS=Glycine max... 0.2 OrthoFinder output from all 47 species
Tin_g18864 ATHSP17.4, HSP17.4 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 54 156
No external refs found!