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  5. GSVIVT01013452001

GSVIVT01013452001 (SPL1R2, ATSPL14, FBR6, SPL14)


Aliases : SPL1R2, ATSPL14, FBR6, SPL14

Description : RNA biosynthesis.transcriptional activation.SBP transcription factor


Gene families : OG0001309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013452001
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00106940 SPL1R2, ATSPL14,... RNA biosynthesis.transcriptional activation.SBP... 0.05 OrthoFinder output from all 47 species
AT1G20980 SPL1R2, ATSPL14,... squamosa promoter binding protein-like 14 0.06 OrthoFinder output from all 47 species
AT2G47070 SPL1 squamosa promoter binding protein-like 1 0.04 OrthoFinder output from all 47 species
Adi_g025056 SPL12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113329 SPL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g01592 SPL1 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G021200.1 Ceric.01G021200 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g20529 SPL12 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_00228 SPL1 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Gb_37539 SPL1R2, ATSPL14,... transcription factor (SBP) 0.05 OrthoFinder output from all 47 species
LOC_Os01g18850.1 SPL1, LOC_Os01g18850 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Len_g08732 SPL1 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427464g0010 No alias transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Mp1g13640.1 No alias transcription factor (SBP) 0.06 OrthoFinder output from all 47 species
Ore_g01911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g36989 SPL1R2, ATSPL14,... SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02484 SPL1 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g068100.4.1 SPL1, Solyc01g068100 Squamosa promoter-binding-like protein 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Zm00001e003571_P002 Zm00001e003571 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e006252_P001 SPL1, Zm00001e006252 transcription factor (SBP) 0.06 OrthoFinder output from all 47 species
Zm00001e011712_P002 SPL1, Zm00001e011712 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e024393_P001 Zm00001e024393 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 122 195
No external refs found!