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  5. GSVIVT01013427001

GSVIVT01013427001


Description : PsbP domain-containing protein 3, chloroplastic OS=Arabidopsis thaliana


Gene families : OG0006517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006517_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013427001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00133p00054340 evm_27.TU.AmTr_v1... PsbP domain-containing protein 3, chloroplastic... 0.12 OrthoFinder output from all 47 species
AT1G76450 No alias Photosystem II reaction center PsbP family protein 0.23 OrthoFinder output from all 47 species
Aev_g38210 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ala_g08526 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Als_g32184 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g18492 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g06130 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Cba_g12145 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.16G011400.1 Ceric.16G011400 not classified & original description: pacid=50589110... 0.15 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021682.6 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre10.g446350 No alias PsbP domain-containing protein 3, chloroplastic... 0.03 OrthoFinder output from all 47 species
Dac_g03626 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g12329 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g07431 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g00853 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
LOC_Os08g40160.1 LOC_Os08g40160 PsbP domain-containing protein 3, chloroplastic... 0.07 OrthoFinder output from all 47 species
Len_g08264 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05889 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
MA_135370g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp8g10040.1 No alias PsbP domain-containing protein 3, chloroplastic... 0.04 OrthoFinder output from all 47 species
Nbi_g06533 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Pir_g08785 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pnu_g17486 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0227.g026375 No alias not classified & original description: CDS=59-778 0.06 OrthoFinder output from all 47 species
Smo448162 No alias PsbP domain-containing protein 3, chloroplastic... 0.08 OrthoFinder output from all 47 species
Spa_g24667 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
Tin_g15416 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e003568_P001 Zm00001e003568 PsbP domain-containing protein 3, chloroplastic... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 93 252
No external refs found!