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  5. GSVIVT01013185001

GSVIVT01013185001


Description : MND1-interacting protein 1 OS=Arabidopsis thaliana


Gene families : OG0001288 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001288_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013185001

Target Alias Description ECC score Gene Family Method Actions
Ehy_g07849 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os09g20550.1 LOC_Os09g20550 MND1-interacting protein 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Pir_g13607 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g34691 No alias E3 ubiquitin ligase *(PIR) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005333 No alias E3 ubiquitin ligase *(PIR) & original description: CDS=227-3001 0.03 OrthoFinder output from all 47 species
Solyc01g080430.4.1 Solyc01g080430 Putative E3 ubiquitin-protein ligase RF298... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!