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  5. GSVIVT01013160001

GSVIVT01013160001 (IKU1)


Aliases : IKU1

Description : Protein HAIKU1 OS=Arabidopsis thaliana


Gene families : OG0002778 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002778_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013160001
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00065p00127930 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT5G46780 No alias VQ motif-containing protein 0.04 OrthoFinder output from all 47 species
Aev_g07022 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene27311.t1 Aspi01Gene27311 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G026900.1 Ceric.27G026900 not classified & original description: pacid=50605834... 0.05 OrthoFinder output from all 47 species
Dac_g10811 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g13048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05322 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Gb_37025 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp8g09220.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g43550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g074520.1.1 Solyc04g074520 VQ motif-containing protein 9 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc06g061190.1.1 IKU1, Solyc06g061190 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 38 63
No external refs found!