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  5. GSVIVT01013055001

GSVIVT01013055001 (XTR4, XTH30)


Aliases : XTR4, XTH30

Description : Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana


Gene families : OG0000942 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000942_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013055001
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AT2G01850 XTH27, ATXTH27, EXGT-A3 endoxyloglucan transferase A3 0.04 OrthoFinder output from all 47 species
Aev_g14417 XTR4, XTH30 EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g17624 XTR4, XTH30 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09026 EXGT-A2, XTH28,... EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os10g42670.1 XTH29, LOC_Os10g42670 Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species
Lfl_g16168 XTR4, XTH30 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g13990.1 EXGT-A2, XTH28,... Probable xyloglucan endotransglucosylase/hydrolase... 0.02 OrthoFinder output from all 47 species
Msp_g12480 XTR4, XTH30 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02177 XTR4, XTH30 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g081060.4.1 XTR4, XTH30,... Probable xyloglucan endotransglucosylase/hydrolase... 0.04 OrthoFinder output from all 47 species
Spa_g55910 EXGT-A2, XTH28,... EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002475_P001 XTH27, ATXTH27,... Probable xyloglucan endotransglucosylase/hydrolase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005618 cell wall IEA Interproscan
BP GO:0006073 cellular glucan metabolic process IEA Interproscan
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEA Interproscan
CC GO:0048046 apoplast IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR000757 GH16 39 218
IPR010713 XET_C 260 296
No external refs found!