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  5. GSVIVT01012888001

GSVIVT01012888001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0002729 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002729_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012888001

Target Alias Description ECC score Gene Family Method Actions
Aev_g07814 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009499 No alias not classified & original description: CDS=187-1533 0.03 OrthoFinder output from all 47 species
LOC_Os02g55520.1 LOC_Os02g55520 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e023678_P001 Zm00001e023678 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 117 160
No external refs found!