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  5. GSVIVT01012782001

GSVIVT01012782001


Description : Pentatricopeptide repeat-containing protein At3g61360 OS=Arabidopsis thaliana


Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012782001

Target Alias Description ECC score Gene Family Method Actions
AT1G55630 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.07 OrthoFinder output from all 47 species
Aev_g04119 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17290 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015082 No alias not classified & original description: CDS=1-1587 0.03 OrthoFinder output from all 47 species
Sam_g14954 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e025816_P001 Zm00001e025816 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e026896_P001 Zm00001e026896 Pentatricopeptide repeat-containing protein At3g62470,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 323 371
IPR002885 Pentatricopeptide_repeat 218 267
IPR002885 Pentatricopeptide_repeat 189 214
IPR002885 Pentatricopeptide_repeat 436 455
No external refs found!