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  5. GSVIVT01012644001

GSVIVT01012644001


Description : Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen lyase(50.4.2 : 564.3) & Tryptophan synthase beta chain 2, chloroplastic OS=Camptotheca acuminata


Gene families : OG0002978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002978_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012644001
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AT5G28237 No alias Pyridoxal-5'-phosphate-dependent enzyme family protein 0.03 OrthoFinder output from all 47 species
AT5G54810 TRP2, TSB1, ATTSB1, TRPB tryptophan synthase beta-subunit 1 0.03 OrthoFinder output from all 47 species
Aop_g69298 TSB2 EC_4.2 carbon-oxygen lyase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g09676 TRP2, TSB1, ATTSB1, TRPB EC_4.2 carbon-oxygen lyase & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g12300.1 TRP2, TSB1, ATTSB1, TRPB subunit beta of tryptophan synthase complex 0.03 OrthoFinder output from all 47 species
Solyc10g005320.3.1 Solyc10g005320 Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... 0.05 OrthoFinder output from all 47 species
Solyc10g018390.3.1 Solyc10g018390 Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... 0.07 OrthoFinder output from all 47 species
Spa_g10445 TSB2 EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016289 CoA hydrolase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001926 TrpB-like_PALP 52 379
No external refs found!