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  5. GSVIVT01012529001

GSVIVT01012529001 (AGO7, ZIP)


Aliases : AGO7, ZIP

Description : Protein argonaute 7 OS=Oryza sativa subsp. japonica


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012529001

Target Alias Description ECC score Gene Family Method Actions
AT2G27880 AGO5 Argonaute family protein 0.04 OrthoFinder output from all 47 species
AT5G21150 AGO9 Argonaute family protein 0.04 OrthoFinder output from all 47 species
Adi_g013023 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.02 OrthoFinder output from all 47 species
Ala_g34221 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08232 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.6 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Dac_g05113 AGO1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g06014 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29067 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Dcu_g48433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g58600.1 AGO5, LOC_Os03g58600 Protein argonaute MEL1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os04g06770.2 AGO4, OCP11,... siRNA-integrating factor (AGO) 0.02 OrthoFinder output from all 47 species
LOC_Os04g47870.1 AGO1, LOC_Os04g47870 RIS-Complex miRNA recruiting factor (AGO1) 0.05 OrthoFinder output from all 47 species
LOC_Os06g39640.1 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species
LOC_Os06g51310.2 AGO1, LOC_Os06g51310 RIS-Complex miRNA recruiting factor (AGO1) 0.04 OrthoFinder output from all 47 species
LOC_Os07g09020.1 AGO5, LOC_Os07g09020 Protein argonaute 14 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Len_g40869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g23190.1 AGO9 siRNA-integrating factor (AGO) 0.02 OrthoFinder output from all 47 species
Mp6g14610.1 PNH, AGO10, ZLL Protein argonaute 1A OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Msp_g20507 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07722 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Nbi_g40097 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g05462 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Ore_g11818 AGO4, OCP11 siRNA-integrating factor *(AGO) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g52026 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.03 OrthoFinder output from all 47 species
Pir_g66376 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.04 OrthoFinder output from all 47 species
Pnu_g18269 AGO6 siRNA-integrating factor *(AGO) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g096750.1.1 AGO4, OCP11,... siRNA-integrating factor (AGO) 0.06 OrthoFinder output from all 47 species
Spa_g12263 AGO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57163 AGO1 regulatory protein *(AGO7) of transacting siRNA pathway... 0.03 OrthoFinder output from all 47 species
Zm00001e034598_P001 AGO1, Zm00001e034598 Protein argonaute 18 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e037347_P002 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR003100 PAZ_dom 351 424
IPR032474 Argonaute_N 151 258
IPR003165 Piwi 523 630
IPR003165 Piwi 640 680
IPR032472 ArgoL2 434 480
IPR014811 ArgoL1 268 317
No external refs found!