1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01012219001

GSVIVT01012219001


Description : Pentatricopeptide repeat-containing protein At1g69290 OS=Arabidopsis thaliana


Gene families : OG0001501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001501_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012219001

Target Alias Description ECC score Gene Family Method Actions
Dac_g16736 CRM3, HCF152 plastidial transcript stability factor *(HCF152) &... 0.03 OrthoFinder output from all 47 species
Ppi_g29056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030247 polysaccharide binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 505 548
IPR025287 WAK_GUB 701 800
IPR002885 Pentatricopeptide_repeat 418 462
IPR002885 Pentatricopeptide_repeat 367 391
IPR002885 Pentatricopeptide_repeat 285 301
IPR032872 WAK_assoc_C 887 927
No external refs found!