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  5. GSVIVT01012163001

GSVIVT01012163001


Description : Polyadenylate-binding protein 2 OS=Arabidopsis thaliana


Gene families : OG0005880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005880_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012163001

Target Alias Description ECC score Gene Family Method Actions
Adi_g104494 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g13294 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G030000.1 Ceric.28G030000 not classified & original description: pacid=50570416... 0.03 OrthoFinder output from all 47 species
Cre16.g685200 No alias No description available 0.04 OrthoFinder output from all 47 species
Dcu_g40735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07881 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os04g52200.1 LOC_Os04g52200 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g12180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp8g17720.1 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g10771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43027 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g40518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g081940.3.1 Solyc02g081940 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g15174 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e041627_P001 Zm00001e041627 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e042214_P001 Zm00001e042214 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 231 301
IPR000504 RRM_dom 648 715
IPR000504 RRM_dom 427 489
IPR000504 RRM_dom 548 622
No external refs found!