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  5. GSVIVT01012108001

GSVIVT01012108001


Description : Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.delta subunit


Gene families : OG0002181 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002181_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012108001
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AT5G05010 No alias clathrin adaptor complexes medium subunit family protein 0.11 OrthoFinder output from all 47 species
Aev_g04019 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.08 OrthoFinder output from all 47 species
Ala_g38100 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Als_g32029 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Als_g32030 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 47 species
Aop_g02872 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008406 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Cba_g08477 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Cba_g14345 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Ceric.32G009500.1 Ceric.32G009500 subunit delta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Cre02.g089100 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.05 OrthoFinder output from all 47 species
Dcu_g08853 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Dcu_g11196 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.18 OrthoFinder output from all 47 species
Gb_08194 No alias subunit delta of cargo adaptor F-subcomplex 0.06 OrthoFinder output from all 47 species
LOC_Os05g24601.1 LOC_Os05g24601 subunit delta of cargo adaptor F-subcomplex 0.13 OrthoFinder output from all 47 species
Len_g21873 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Lfl_g01632 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
MA_20701g0010 No alias subunit delta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
MA_7657529g0010 No alias subunit delta of cargo adaptor F-subcomplex 0.05 OrthoFinder output from all 47 species
Mp3g04840.1 No alias subunit delta of cargo adaptor F-subcomplex 0.05 OrthoFinder output from all 47 species
Msp_g01169 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Msp_g12080 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Nbi_g09025 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.1 OrthoFinder output from all 47 species
Ore_g08393 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Ppi_g05201 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Ppi_g32801 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Sam_g18686 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Sam_g18687 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Smo172790 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.11 OrthoFinder output from all 47 species
Solyc01g103480.3.1 Solyc01g103480 subunit delta of cargo adaptor F-subcomplex 0.16 OrthoFinder output from all 47 species
Spa_g05208 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Spa_g26901 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Tin_g00962 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Tin_g08212 No alias subunit delta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Zm00001e018368_P003 Zm00001e018368 subunit delta of cargo adaptor F-subcomplex 0.1 OrthoFinder output from all 47 species
Zm00001e039766_P001 Zm00001e039766 subunit delta of cargo adaptor F-subcomplex 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005801 cis-Golgi network IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0097354 prenylation IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR028565 MHD 316 535
No external refs found!