1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01012035001

GSVIVT01012035001 (YSL7)


Aliases : YSL7

Description : Nutrient uptake.iron uptake.chelation-based strategy uptake.YSL-type Fe(III)-chelator transporter


Gene families : OG0000334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000334_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01012035001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00045420 ATYSL3, YSL3,... Solute transport.carrier-mediated transport.OPT... 0.04 OrthoFinder output from all 47 species
AMTR_s00029p00088380 YSL7,... Probable metal-nicotianamine transporter YSL5... 0.04 OrthoFinder output from all 47 species
AMTR_s00029p00088690 YSL7,... Solute transport.carrier-mediated transport.OPT... 0.05 OrthoFinder output from all 47 species
AMTR_s00029p00090040 YSL7,... Solute transport.carrier-mediated transport.OPT... 0.04 OrthoFinder output from all 47 species
AMTR_s00029p00090440 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.02 OrthoFinder output from all 47 species
AMTR_s00103p00133280 ATYSL3, YSL3,... Solute transport.carrier-mediated transport.OPT... 0.04 OrthoFinder output from all 47 species
AMTR_s00103p00133560 ATYSL3, YSL3,... Solute transport.carrier-mediated transport.OPT... 0.04 OrthoFinder output from all 47 species
AMTR_s00154p00062710 YSL4,... Solute transport.carrier-mediated transport.OPT... 0.03 OrthoFinder output from all 47 species
AMTR_s00154p00064550 YSL7,... Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.03 OrthoFinder output from all 47 species
AMTR_s00154p00064710 YSL4,... Solute transport.carrier-mediated transport.OPT... 0.02 OrthoFinder output from all 47 species
AT3G27020 YSL6 YELLOW STRIPE like 6 0.03 OrthoFinder output from all 47 species
AT4G24120 ATYSL1, YSL1 YELLOW STRIPE like 1 0.04 OrthoFinder output from all 47 species
Adi_g023430 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Adi_g044334 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Adi_g058645 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Ala_g02368 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Als_g28455 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Als_g29345 YSL5, PDE321 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Als_g39810 YSL6 iron chelator transporter *(YSL) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11416 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Aop_g19816 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Aop_g71362 ATYSL1, YSL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene03881.t1 YSL6, Aspi01Gene03881 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene03886.t1 YSL6, Aspi01Gene03886 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene29929.t1 YSL6, Aspi01Gene29929 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0280.g062272 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0402.g068325 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0621.g079593 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Dac_g37280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23775 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Dde_g07401 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g03908 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01012036001 YSL7 Nutrient uptake.iron uptake.chelation-based strategy... 0.02 OrthoFinder output from all 47 species
GSVIVT01019646001 ATYSL1, YSL1 Nutrient uptake.iron uptake.chelation-based strategy... 0.04 OrthoFinder output from all 47 species
GSVIVT01029349001 YSL7 Nutrient uptake.iron uptake.chelation-based strategy... 0.03 OrthoFinder output from all 47 species
Gb_39396 ATYSL3, YSL3 iron chelator transporter (YSL) 0.04 OrthoFinder output from all 47 species
Gb_41263 YSL7 iron chelator transporter (YSL). ferric cation-chelator... 0.04 OrthoFinder output from all 47 species
LOC_Os01g13710.1 YSL7, LOC_Os01g13710 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
LOC_Os02g02450.1 YSL8, LOC_Os02g02450 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
LOC_Os04g32050.1 YSL6, LOC_Os04g32050 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
LOC_Os04g44300.1 YSL7, LOC_Os04g44300 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
LOC_Os04g44320.1 YSL7, LOC_Os04g44320 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
LOC_Os04g45900.1 ATYSL2, YSL2,... iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
LOC_Os05g16290.1 YSL7, LOC_Os05g16290 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Len_g41418 YSL6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431747g0010 YSL7 Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.04 OrthoFinder output from all 47 species
MA_110581g0010 ATYSL3, YSL3 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
MA_8914283g0010 ATYSL3, YSL3 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g01710.1 YSL6 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Msp_g09049 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g01196 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g08018 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g40521 YSL7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g07859 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Pir_g52007 YSL6 iron chelator transporter *(YSL) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10590 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.05 OrthoFinder output from all 47 species
Pp3c2_34990V3.1 YSL6, Pp3c2_34990 YELLOW STRIPE like 6 0.03 OrthoFinder output from all 47 species
Sam_g16874 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16877 No alias iron chelator transporter *(YSL) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18011 No alias ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Sam_g22236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo269976 YSL6 Nutrient uptake.iron uptake.chelation-based strategy... 0.03 OrthoFinder output from all 47 species
Solyc03g031920.3.1 YSL7, Solyc03g031920 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Spa_g14612 YSL7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26130 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Spa_g41382 ATYSL1, YSL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007544_P001 YSL7, Zm00001e007544 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Zm00001e008356_P001 YSL6, Zm00001e008356 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Zm00001e008357_P001 YSL6, Zm00001e008357 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Zm00001e015280_P004 ATYSL3, YSL3,... iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
Zm00001e023053_P001 YSL7, Zm00001e023053 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Zm00001e025368_P001 YSL7, Zm00001e025368 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Zm00001e026901_P002 YSL7, Zm00001e026901 iron chelator transporter (YSL). ferric cation-chelator... 0.03 OrthoFinder output from all 47 species
Zm00001e028817_P001 YSL7, Zm00001e028817 iron chelator transporter (YSL). ferric cation-chelator... 0.02 OrthoFinder output from all 47 species
Zm00001e041266_P002 YSL7, Zm00001e041266 iron chelator transporter (YSL). ferric cation-chelator... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR004813 OPT 358 478
IPR004813 OPT 1 343
No external refs found!