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  5. GSVIVT01011943001

GSVIVT01011943001 (WIP6, DOT5)


Aliases : WIP6, DOT5

Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0001814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001814_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011943001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00243980 WIP2, NTT,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 OrthoFinder output from all 47 species
AT1G13290 WIP6, DOT5 C2H2-like zinc finger protein 0.04 OrthoFinder output from all 47 species
AT1G51220 WIP5 WIP domain protein 5 0.02 OrthoFinder output from all 47 species
Gb_21793 WIP2, NTT C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os09g13680.1 WIP6, DOT5,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
MA_3555g0010 WIP6, DOT5 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Sam_g22187 No alias C2H2 subclass WIP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Smo57114 WIP2, NTT RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 OrthoFinder output from all 47 species
Solyc05g009770.3.1 WIP6, DOT5,... C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e003504_P001 WIP2, NTT, Zm00001e003504 C2H2 zinc finger transcription factor 0.06 OrthoFinder output from all 47 species
Zm00001e009663_P001 WIP6, DOT5,... C2H2 zinc finger transcription factor 0.09 OrthoFinder output from all 47 species
Zm00001e024373_P001 WIP2, NTT, Zm00001e024373 C2H2 zinc finger transcription factor 0.06 OrthoFinder output from all 47 species
Zm00001e033781_P001 WIP6, DOT5,... C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!