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  5. GSVIVT01011926001

GSVIVT01011926001 (PCR2)


Aliases : PCR2

Description : Cell number regulator 2 OS=Zea mays


Gene families : OG0000293 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011926001
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00033430 evm_27.TU.AmTr_v1... Cell number regulator 10 OS=Zea mays 0.04 OrthoFinder output from all 47 species
AT1G49030 No alias PLAC8 family protein 0.03 OrthoFinder output from all 47 species
AT3G18460 No alias PLAC8 family protein 0.03 OrthoFinder output from all 47 species
AT5G35525 No alias PLAC8 family protein 0.07 OrthoFinder output from all 47 species
Adi_g054154 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g15014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08035 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01614 PCR11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g48118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15484.t1 Aspi01Gene15484 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g01787 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G000300.1 Ceric.19G000300 not classified & original description: pacid=50576139... 0.03 OrthoFinder output from all 47 species
Cre02.g097150 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os02g36950.1 LOC_Os02g36950 Protein PLANT CADMIUM RESISTANCE 3 OS=Arabidopsis... 0.12 OrthoFinder output from all 47 species
LOC_Os02g52550.1 LOC_Os02g52550 Cell number regulator 1 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
LOC_Os03g61470.1 LOC_Os03g61470 Cell number regulator 10 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
Lfl_g00258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29762 PCR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_23074g0010 No alias Cell number regulator 1 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
MA_7245g0010 PCR11 Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp5g01110.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp5g01890.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g04389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007631 No alias not classified & original description: CDS=143-850 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011838 No alias not classified & original description: CDS=150-581 0.03 OrthoFinder output from all 47 species
Smo439474 No alias Cell number regulator 4 OS=Zea mays 0.03 OrthoFinder output from all 47 species
Solyc08g013910.4.1 PCR2, Solyc08g013910 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc08g013920.3.1 Solyc08g013920 Cell number regulator 1 OS=Zea mays... 0.07 OrthoFinder output from all 47 species
Solyc10g018920.2.1 Solyc10g018920 Cell number regulator 6 OS=Zea mays... 0.06 OrthoFinder output from all 47 species
Tin_g03784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g37114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e011704_P001 PCR2, Zm00001e011704 Cell number regulator 10 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Zm00001e023819_P001 Zm00001e023819 Cell number regulator 1 OS=Zea mays... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR006461 PLAC_motif_containing 74 172
No external refs found!