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  5. GSVIVT01011819001

GSVIVT01011819001


Description : RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor


Gene families : OG0003489 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003489_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011819001

Target Alias Description ECC score Gene Family Method Actions
AT1G66810 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.03 OrthoFinder output from all 47 species
AT1G68200 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.05 OrthoFinder output from all 47 species
Ceric.06G081500.1 Ceric.06G081500 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01030969001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.05 OrthoFinder output from all 47 species
LOC_Os01g45730.1 LOC_Os01g45730 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Msp_g33323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g54698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo112852 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.01 OrthoFinder output from all 47 species
Solyc05g008670.3.1 Solyc05g008670 C3H zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Spa_g48187 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e032502_P003 Zm00001e032502 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0006879 cellular iron ion homeostasis IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
BP GO:0008272 sulfate transport IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0046916 cellular transition metal ion homeostasis IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055072 iron ion homeostasis IEP HCCA
BP GO:0055076 transition metal ion homeostasis IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 315 340
No external refs found!