GSVIVT01011807001 (FATB)

Aliases : FATB

Description : External stimuli response.biotic stress.symbiont-associated response.lipid biosynthesis.FatM palmitoyl-ACP thioesterase

Gene families : OG0000593 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000593_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01011807001

Target	Alias	Description	ECC score	Gene Family Method
AT1G08510	FATB	fatty acyl-ACP thioesterases B	0.03	OrthoFinder output from all 47 species
Adi_g033770	FATB	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene50042.t1	FATB, Aspi01Gene50042	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.18G006500.1	Ceric.18G006500	oleoyl-ACP thioesterase *(FATA) & original description:...	0.02	OrthoFinder output from all 47 species
Dde_g13165	No alias	oleoyl-ACP thioesterase *(FATA) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g08294	FaTA, AtFaTA	oleoyl-ACP thioesterase *(FATA) & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os11g43820.1	FATB, LOC_Os11g43820	palmitoyl-ACP thioesterase	0.03	OrthoFinder output from all 47 species
MA_338g0010	FaTA, AtFaTA	Oleoyl-acyl carrier protein thioesterase 1,...	0.04	OrthoFinder output from all 47 species
Msp_g26586	No alias	oleoyl-ACP thioesterase *(FATA) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g22456	No alias	oleoyl-ACP thioesterase *(FATA) & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g29686	FATB	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e036534_P002	FATB, Zm00001e036534	palmitoyl-ACP thioesterase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016790	thiolester hydrolase activity	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	617	666
IPR002885	Pentatricopeptide_repeat	547	594
IPR002885	Pentatricopeptide_repeat	337	386
IPR002885	Pentatricopeptide_repeat	407	456
IPR002885	Pentatricopeptide_repeat	232	281
IPR002885	Pentatricopeptide_repeat	170	194
IPR002864	Acyl-ACP_thioesterase	775	1053
IPR002885	Pentatricopeptide_repeat	508	541
IPR002885	Pentatricopeptide_repeat	299	331

External Links

No external refs found!