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  5. GSVIVT01011789001

GSVIVT01011789001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-v-type E3 ligase


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011789001

Target Alias Description ECC score Gene Family Method Actions
Adi_g009055 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g074839 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g116162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09335 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G007100.1 Ceric.16G007100 E3 ubiquitin ligase & original description:... 0.06 OrthoFinder output from all 47 species
Dcu_g06352 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g48587 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17220 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028110001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_37740 No alias RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os01g66970.1 LOC_Os01g66970 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os05g28730.1 LOC_Os05g28730 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000908 No alias E3 ubiquitin ligase & original description: CDS=1-1032 0.02 OrthoFinder output from all 47 species
Solyc01g079530.4.1 Solyc01g079530 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc03g116030.4.1 Solyc03g116030 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022143 DUF3675 123 239
IPR011016 Znf_RING-CH 72 117
No external refs found!