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  5. GSVIVT01011755001

GSVIVT01011755001


Description : Solute transport.carrier-mediated transport.BART superfamily.AEC family.auxin efflux transporter (PIN-type)


Gene families : OG0000569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000569_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011755001
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00149240 ATPIN1, PIN1,... Solute transport.carrier-mediated transport.BART... 0.04 OrthoFinder output from all 47 species
AT1G70940 PIN3, ATPIN3 Auxin efflux carrier family protein 0.03 OrthoFinder output from all 47 species
Adi_g050328 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31784 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g14250 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38942 PIN3, ATPIN3 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G017000.1 ATPIN4, PIN4,... auxin efflux transporter *(PIN) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g33596 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_29191 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 OrthoFinder output from all 47 species
MA_100472g0010 ATPIN4, PIN4 auxin transporter (PIN). auxin efflux transporter (PIN) 0.05 OrthoFinder output from all 47 species
MA_61553g0010 PIN3, ATPIN3 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Mp3g21660.1 ATPIN4, PIN4 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Sam_g28472 No alias auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Smo99301 ATPIN4, PIN4 Solute transport.carrier-mediated transport.BART... 0.02 OrthoFinder output from all 47 species
Solyc05g008060.4.1 PIN3, ATPIN3,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Zm00001e023910_P002 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
Zm00001e036089_P001 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004776 Mem_trans 10 71
No external refs found!