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Aliases : SCC2, ATSCC2, EMB2773
Description : Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin loading.SCC2 adherin
Gene families : OG0005074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005074_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01011514001 | |
| Cluster | HCCA: Cluster_95 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00110p00053630 | SCC2, ATSCC2,... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.06 | OrthoFinder output from all 47 species | |
| AT5G15540 | SCC2, ATSCC2, EMB2773 | PHD finger family protein | 0.12 | OrthoFinder output from all 47 species | |
| Aev_g04894 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g16239 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g08111 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g31097 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g05755 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene15027.t1 | SCC2, ATSCC2,... | adherin *(SCC2) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene15029.t1 | SCC2, ATSCC2,... | adherin *(SCC2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g007745 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: CDS=544-5985 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.14G000800.1 | SCC2, ATSCC2,... | adherin *(SCC2) & original description: pacid=50634323... | 0.12 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001085.24 | SCC2, ATSCC2, EMB2773 | Cell cycle.mitosis and meiosis.sister chromatid... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g39401 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Dde_g02409 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g06224 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Gb_05661 | SCC2, ATSCC2, EMB2773 | adherin (SCC2) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g01940.1 | SCC2, ATSCC2,... | adherin (SCC2) | 0.1 | OrthoFinder output from all 47 species | |
| Len_g24640 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05042 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.11 | OrthoFinder output from all 47 species | |
| MA_10437214g0020 | SCC2, ATSCC2, EMB2773 | adherin (SCC2) | 0.1 | OrthoFinder output from all 47 species | |
| Mp4g10640.1 | SCC2, ATSCC2, EMB2773 | adherin (SCC2) | 0.07 | OrthoFinder output from all 47 species | |
| Msp_g24576 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g28623 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g28888 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g08021 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g05355 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g26001 | No alias | adherin *(SCC2) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g48907 | No alias | adherin *(SCC2) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Smo440913 | SCC2, ATSCC2, EMB2773 | Cell cycle.mitosis and meiosis.sister chromatid... | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g04412 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g05250 | SCC2, ATSCC2, EMB2773 | adherin *(SCC2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e011569_P001 | SCC2, ATSCC2,... | adherin (SCC2) | 0.11 | OrthoFinder output from all 47 species | |
| Zm00001e032695_P001 | SCC2, ATSCC2,... | adherin (SCC2) | 0.12 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005543 | phospholipid binding | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| No external refs found! |