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Description : Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana
Gene families : OG0006286 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006286_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G09190 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G09220 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT1G33350 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G29230 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.09 | OrthoFinder output from all 47 species | |
| AT3G51320 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G56310 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01024493001 | No alias | Pentatricopeptide repeat-containing protein At4g39952,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01025389001 | OTP82 | Pentatricopeptide repeat-containing protein At5g48910... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01035920001 | OTP82 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_33068 | No alias | Pentatricopeptide repeat-containing protein DOT4,... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g07330.1 | LOC_Os03g07330 | Pentatricopeptide repeat-containing protein At5g56310... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g01635.1 | LOC_Os05g01635 | Pentatricopeptide repeat-containing protein At3g51320... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10248752g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g088470.1.1 | Solyc02g088470 | Pentatricopeptide repeat-containing protein At3g29230... | 0.08 | OrthoFinder output from all 47 species | |
| Solyc02g094125.1.1 | Solyc02g094125 | Pentatricopeptide repeat-containing protein At5g56310... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g006800.2.1 | CRR28, Solyc05g006800 | Pentatricopeptide repeat-containing protein At1g59720,... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc08g079640.3.1 | OTP82, Solyc08g079640 | Pentatricopeptide repeat-containing protein At3g51320... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| No external refs found! |