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  5. GSVIVT01011464001

GSVIVT01011464001 (HYP1, ATHYP1)


Aliases : HYP1, ATHYP1

Description : Solute transport.channels.OSCA calcium-permeable channel


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011464001

Target Alias Description ECC score Gene Family Method Actions
Ala_g09676 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13075 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene57219.t1 Aspi01Gene57219 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G055700.1 Ceric.16G055700 calcium-permeable channel *(OSCA) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000227.25 No alias CSC1-like protein ERD4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cre08.g360600 No alias Solute transport.channels.OSCA calcium-permeable channel 0.02 OrthoFinder output from all 47 species
MA_10430247g0010 RXW8 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
Msp_g07790 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04933 HYP1, ATHYP1 calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g14172 ERD4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g081030.4.1 Solyc02g081030 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
Solyc09g064810.4.1 Solyc09g064810 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003864 CSC1/OSCA1-like_7TM 560 824
IPR032880 Csc1/OSCA1-like_N 6 152
IPR027815 CSC1/OSCA1-like_cyt 391 546
No external refs found!