LOC_Os04g13210.1


Description : subfamily ABCC transporter


Gene families : OG_01_0000058 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000058_tree ,
OG_02_0001822 (LandPlants) Phylogenetic Tree(s): OG_02_0001822_tree ,
OG_03_0004319 (SeedPlants) Phylogenetic Tree(s): OG_03_0004319_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g13210.1
Cluster HCCA: Cluster_365

Target Alias Description ECC score Gene Family Method Actions
Cre03.g174050 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Cre07.g325761 No alias ABC transporter C family member 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01019475001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01021595001 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
MA_10436190g0020 No alias ABC transporter C family member 10 OS=Arabidopsis... 0.04 Archaeplastida
MA_10436190g0030 No alias ABC transporter C family member 10 OS=Arabidopsis... 0.03 Archaeplastida
MA_10436190g0040 No alias ABC transporter C family member 10 OS=Arabidopsis... 0.02 Archaeplastida
MA_556337g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_602830g0010 No alias ABC transporter C family member 10 OS=Arabidopsis... 0.02 Archaeplastida
MA_629244g0010 No alias subfamily ABCC transporter 0.05 Archaeplastida
Mp4g15590.1 No alias subfamily ABCC transporter 0.02 Archaeplastida
Mp7g13860.1 No alias subfamily ABCC transporter 0.02 Archaeplastida
Smo144775 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Smo163772 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo163776 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Smo402326 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Smo93699 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Smo94 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Solyc09g075020.3.1 No alias subfamily ABCC transporter 0.05 Archaeplastida
Solyc10g024420.3.1 No alias subfamily ABCC transporter 0.03 Archaeplastida
Zm00001e038918_P002 No alias subfamily ABCC transporter 0.04 Archaeplastida
AT3G62700 MRP10, ATMRP10, ABCC14 multidrug resistance-associated protein 10 0.03 LandPlants
Gb_36600 No alias subfamily ABCC transporter 0.02 SeedPlants
MA_556337g0010 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 6 263
IPR011527 ABC1_TM_dom 653 891
IPR003439 ABC_transporter-like 361 494
IPR003439 ABC_transporter-like 982 1130
No external refs found!