Description : Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana
Gene families : OG0006286 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006286_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01011455001 | |
Cluster | HCCA: Cluster_70 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00024p00191430 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g21065... | 0.04 | OrthoFinder output from all 47 species | |
AT1G09220 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
AT1G33350 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
AT5G56310 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
GSVIVT01025389001 | OTP82 | Pentatricopeptide repeat-containing protein At5g48910... | 0.01 | OrthoFinder output from all 47 species | |
GSVIVT01035920001 | OTP82 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.01 | OrthoFinder output from all 47 species | |
Gb_33068 | No alias | Pentatricopeptide repeat-containing protein DOT4,... | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os03g07330.1 | LOC_Os03g07330 | Pentatricopeptide repeat-containing protein At5g56310... | 0.01 | OrthoFinder output from all 47 species | |
MA_10248752g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.01 | OrthoFinder output from all 47 species | |
Solyc02g094125.1.1 | Solyc02g094125 | Pentatricopeptide repeat-containing protein At5g56310... | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
No external refs found! |