GSVIVT01011433001 (CDF2)

Aliases : CDF2

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.DOF transcription factor

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01011433001

Target	Alias	Description	ECC score	Gene Family Method
AT1G26790	No alias	Dof-type zinc finger DNA-binding family protein	0.05	OrthoFinder output from all 47 species
AT5G62430	CDF1	cycling DOF factor 1	0.07	OrthoFinder output from all 47 species
Adi_g079893	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g110724	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g04142	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g70751	CDF3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0054.g033832	CDF3	transcription factor *(DOF) & original description: CDS=354-1853	0.02	OrthoFinder output from all 47 species
Cba_g04480	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g17628	TMO6	transcription factor *(DOF) & original description: none	0.05	OrthoFinder output from all 47 species
Gb_07177	CDF2	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Len_g15959	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g30040	CDF2	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g45088	TMO6	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g42354	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Solyc02g067230.3.1	CDF2, Solyc02g067230	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
Solyc02g088070.3.1	CDF3, Solyc02g088070	transcription factor (DOF)	0.07	OrthoFinder output from all 47 species
Solyc03g082840.3.1	DAG1, Solyc03g082840	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Solyc05g007880.4.1	CDF1, Solyc05g007880	Cyclic dof factor 2 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
Solyc06g069760.3.1	CDF3, Solyc06g069760	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
Solyc06g075370.3.1	TMO6, Solyc06g075370	transcription factor (DOF)	0.06	OrthoFinder output from all 47 species
Tin_g14914	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e017319_P001	CDF2, Zm00001e017319	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	144	200

External Links

No external refs found!

GSVIVT01011433001 (CDF2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation