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  5. GSVIVT01011380001

GSVIVT01011380001


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0009654 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009654_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011380001

Target Alias Description ECC score Gene Family Method Actions
AT3G28857 No alias basic helix-loop-helix (bHLH) DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT5G15160 BNQ2, BHLH134 BANQUO 2 0.05 OrthoFinder output from all 47 species
GSVIVT01008034001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
LOC_Os02g51320.1 LOC_Os02g51320 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os03g07540.1 LOC_Os03g07540 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os04g54900.1 KDR, LOC_Os04g54900 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os10g26460.1 LOC_Os10g26460 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os11g39000.1 ATBS1, TMO7,... transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc02g067380.4.1 KDR, Solyc02g067380 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e023896_P001 KDR, Zm00001e023896 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 21 58
No external refs found!