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  5. GSVIVT01011111001

GSVIVT01011111001 (ATIWS1, IWS1)


Aliases : ATIWS1, IWS1

Description : Protein IWS1 homolog 1 OS=Arabidopsis thaliana


Gene families : OG0004677 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004677_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011111001
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Adi_g080516 ATIWS1, IWS1 component *(IWS1) of SPT6-IWS1 transcription elongation... 0.02 OrthoFinder output from all 47 species
Ceric.25G030500.1 ATIWS1, IWS1,... component *(IWS1) of SPT6-IWS1 transcription elongation... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020610.27 ATIWS1, IWS1 Protein IWS1 homolog 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g01536 ATIWS1, IWS1 component *(IWS1) of SPT6-IWS1 transcription elongation... 0.04 OrthoFinder output from all 47 species
Lfl_g10700 ATIWS1, IWS1 component *(IWS1) of SPT6-IWS1 transcription elongation... 0.02 OrthoFinder output from all 47 species
MA_171070g0010 ATIWS1, IWS1 component IWS1 of SPT6-IWS1 transcription elongation complex 0.03 OrthoFinder output from all 47 species
Solyc06g066320.3.1 ATIWS1, IWS1,... component IWS1 of SPT6-IWS1 transcription elongation complex 0.03 OrthoFinder output from all 47 species
Zm00001e025802_P001 ATIWS1, IWS1,... component IWS1 of SPT6-IWS1 transcription elongation complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR017923 TFIIS_N 330 375
No external refs found!