1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01011100001

GSVIVT01011100001


Description : RNA biosynthesis.transcriptional activation.HUA2 transcription factor


Gene families : OG0001723 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001723_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011100001
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00079800 HUA2,... RNA biosynthesis.transcriptional activation.HUA2... 0.04 OrthoFinder output from all 47 species
AT3G63070 No alias Tudor/PWWP/MBT domain-containing protein 0.13 OrthoFinder output from all 47 species
AT5G23150 HUA2 Tudor/PWWP/MBT domain-containing protein 0.07 OrthoFinder output from all 47 species
Adi_g018066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055484 HUA2 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g077952 HUA2 HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086266 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11061 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12546 HUA2 HUA2-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g15874 HUA2 HUA2-type transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Als_g29120 HUA2 HUA2-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Als_g55257 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22454 HUA2 HUA2-type transcription factor & original description: none 0.11 OrthoFinder output from all 47 species
Aob_g42142 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17265 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20186 HUA2 HUA2-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene06214.t1 HUA2, Aspi01Gene06214 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42433.t1 Aspi01Gene42433 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009802 HUA2 HUA2-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Azfi_s0032.g024616 HUA2 HUA2-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Azfi_s0119.g046734 HUA2 HUA2-type transcription factor & original description: CDS=1-4872 0.03 OrthoFinder output from all 47 species
Ceric.33G048700.1 HUA2, Ceric.33G048700 HUA2-type transcription factor & original description:... 0.12 OrthoFinder output from all 47 species
Ceric.36G034600.1 HUA2, Ceric.36G034600 HUA2-type transcription factor & original description:... 0.16 OrthoFinder output from all 47 species
Dac_g09393 HUA2 HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08999 No alias HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14860 HUA2 HUA2-type transcription factor & original description: none 0.13 OrthoFinder output from all 47 species
Ehy_g21799 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g25712 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Gb_39860 HUA2 transcription factor (HUA2) 0.06 OrthoFinder output from all 47 species
LOC_Os03g24339.1 LOC_Os03g24339 transcription factor (HUA2) 0.11 OrthoFinder output from all 47 species
LOC_Os07g46180.1 LOC_Os07g46180 transcription factor (HUA2) 0.14 OrthoFinder output from all 47 species
LOC_Os08g01054.2 HUA2, LOC_Os08g01054 transcription factor (HUA2) 0.12 OrthoFinder output from all 47 species
Len_g21971 HUA2 HUA2-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Len_g53945 HUA2 HUA2-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g04290 HUA2 HUA2-type transcription factor & original description: none 0.12 OrthoFinder output from all 47 species
MA_3338g0010 No alias transcription factor (HUA2) 0.06 OrthoFinder output from all 47 species
MA_9328225g0010 HUA2 Protein HUA2-LIKE 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_9359526g0010 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Mp8g15320.1 HUA2 transcription factor (HUA2) 0.15 OrthoFinder output from all 47 species
Msp_g27240 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08516 HUA2 HUA2-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g36625 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36626 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g16391 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g24326 No alias HUA2-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g13849 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13358 HUA2 HUA2-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011426 HUA2 HUA2-type transcription factor & original description: CDS=5-4222 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013240 HUA2 HUA2-type transcription factor & original description: CDS=1-3765 0.03 OrthoFinder output from all 47 species
Sam_g30186 No alias HUA2-type transcription factor & original description: none 0.1 OrthoFinder output from all 47 species
Sam_g51385 No alias HUA2-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Smo404055 HUA2 RNA biosynthesis.transcriptional activation.HUA2... 0.05 OrthoFinder output from all 47 species
Smo414202 HUA2 RNA biosynthesis.transcriptional activation.HUA2... 0.07 OrthoFinder output from all 47 species
Solyc02g014115.1.1 HUA2, Solyc02g014115 transcription factor (HUA2) 0.09 OrthoFinder output from all 47 species
Solyc02g014130.3.1 HUA2, Solyc02g014130 ENHANCER OF AG-4 protein 2 OS=Arabidopsis thaliana... 0.18 OrthoFinder output from all 47 species
Solyc09g064840.4.1 Solyc09g064840 transcription factor (HUA2) 0.18 OrthoFinder output from all 47 species
Spa_g08440 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10511 HUA2 HUA2-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18277 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g11569 HUA2 HUA2-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e001720_P002 Zm00001e001720 transcription factor (HUA2) 0.17 OrthoFinder output from all 47 species
Zm00001e024276_P001 HUA2, Zm00001e024276 transcription factor (HUA2) 0.17 OrthoFinder output from all 47 species
Zm00001e029104_P001 HUA2, Zm00001e029104 transcription factor (HUA2) 0.12 OrthoFinder output from all 47 species
Zm00001e038169_P004 Zm00001e038169 transcription factor (HUA2) 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004402 histone acetyltransferase activity IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 24 73
No external refs found!