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  5. GSVIVT01011097001

GSVIVT01011097001


Description : Solute transport.channels.OSCA calcium-permeable channel


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011097001

Target Alias Description ECC score Gene Family Method Actions
AT3G54510 No alias Early-responsive to dehydration stress protein (ERD4) 0.05 OrthoFinder output from all 47 species
Adi_g020490 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0795.g087273 ERD4 not classified & original description: CDS=84-998 0.06 OrthoFinder output from all 47 species
Cba_g27537 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Cre13.g574850 No alias CSC1-like protein At1g32090 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g07879 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17232 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40944 No alias calcium-permeable channel *(OSCA) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01012666001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.03 OrthoFinder output from all 47 species
Gb_11287 No alias calcium-permeable channel (OSCA) 0.04 OrthoFinder output from all 47 species
Len_g05384 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10186845g0010 No alias CSC1-like protein At3g21620 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Sam_g29118 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002499_P001 Zm00001e002499 calcium-permeable channel (OSCA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR027815 CSC1/OSCA1-like_cyt 209 370
IPR032880 Csc1/OSCA1-like_N 7 177
IPR003864 CSC1/OSCA1-like_7TM 381 653
No external refs found!