GSVIVT01011033001 (GAMMA-H2AX, H2AXB,...)


Aliases : GAMMA-H2AX, H2AXB, HTA3, G-H2AX

Description : Chromatin organisation.histones.H2A-type histone


Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01011033001

Target Alias Description ECC score Gene Family Method Actions
Adi_g052170 HTA10 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33682 HTA6 histone *(H2A) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05349.t1 HTA6, Aspi01Gene05349 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001085.4 GAMMA-H2AX,... Chromatin organisation.histones.H2A-type histone 0.02 OrthoFinder output from all 47 species
Dde_g15481 RAT5, HTA1, ATHTA1 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g05881 HTA6 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10951 HTA6 histone *(H2A) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 94 127
IPR007125 Histone_H2A/H2B/H3 8 91
No external refs found!