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Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.NDX transcription factor
Gene families : OG0003424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003424_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00025p00031700 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.HB... | 0.06 | OrthoFinder output from all 47 species | |
| Aev_g15011 | No alias | NDX-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g02709 | No alias | NDX-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g07774 | No alias | NDX-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g08164 | No alias | NDX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_20565 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g09630.1 | LOC_Os05g09630 | transcription factor (NDX) | 0.03 | OrthoFinder output from all 47 species | |
| MA_57200g0010 | No alias | transcription factor (NDX) | 0.07 | OrthoFinder output from all 47 species | |
| MA_86321g0010 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Mp1g16560.1 | No alias | transcription factor (NDX) | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g43437 | No alias | NDX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g44275 | No alias | NDX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12626 | No alias | NDX-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g30227 | No alias | NDX-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo446032 | No alias | RNA biosynthesis.transcriptional activation.HB... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |